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论文著作 Publications
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Fu, Y., Qu, Z., Wang, Y., Sun, P., Jiao, N., Xu*, D. 2024. Biogeographical and biodiversity patterns of planktonic microeukaryotes along the tropical western to eastern Pacific Ocean transect revealed by metabarcoding. Microbiology Spectrum 
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Hu, C., Yu, L., Chen, X., Liu, J., Zhang, Y., Batt, J., Xiao, X., Shi, Q., Zhang, R., Luo, T., Jiao*, N., Xu*, D. 2024. Adaptive strategies of high and low nucleic acid prokaryotes in response to declining resource availability and selective grazing by protozoa. Science China Earth Sciences, 67, https://doi.org/10.1007/s11430-023-1326-2
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Sun*, P., Wang, Y., Huang, X., Xu, S., Logares, R., Huang, Y., Xu, D., Huang, B. 2024. Cracking the dynamic code of the deep: Unexpected seasonal patterns of active protistan-bacterial microbiomes in the mesopelagic zone of the South China Sea. Progress in Oceanography, 225, 103280.
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Zhang, H., Li, R., Gu, B., Kong, H., Xu, J., Zhang, R., Li, X., Jiao, N., Xu*, D. 2024. Dynamics of haptophytes (Eukaryota, Hacrobia) revealed via short-term sampling in the South China Sea. Journal of Ocean University of China, 23: 1677-1688.
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Kong, H., Yang, E., Jiao, N., Lee, Y., Jung, J., Cho, K., Moon, J., Kim, J., Xu*, D. 2023. RNA outperforms DNA-based metabarcoding in assessing the diversity and response of microeukaryotes to environmental variables in the Arctic Ocean. Sci. Total. Environ.
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Sun*, P., Wang, Y., Zhang, Y., Logares, R., Cheng, P., Xu, D., Huang, B. 2023. From the sunlit to the aphotic zone: Assembly mechanisms and co-occurrence patterns of protistan-bacterial microbiotas in the western Pacific Ocean. mSystems
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Gu, B., Huang, H., Zhang, Y., Li, R., Wang, L., Wang, Y., Sun, J., Wang, J., Zhang, R., Jiao, N., Xu*, D. 2022. High dynamics of ciliate community revealed via short-term, high-frequency sampling in a subtropical estuarine ecosystem. Front. Microbiol. 13:797638. doi: 10.3389/fmicb.2022.797638
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Sun, P., Liao, Y., Wang, Y., Yang, E.-J., Jiao, N., Lee, Y., Jung, J., Cho, K.-H., Moon, J.-K., Xu*, D. 2022. Contrasting community composition and co-occurrence relationships of the active pico-sized haptophytes in the surface and subsurface chlorophyll maximum layers of the Arctic Ocean in Summer. Microorganisms 2022, 10, 248. https://doi.org/10.3390/microorganisms10020248
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Xu*, D., Kong, H., Yang, E.J., Wang, Y., Li, X., Sun*, P., Jiao, N., Lee, Y., Jung, J., Cho, K. 2022. Spatial dynamics of active microeukaryotes along a latitudinal gradient: diversity, assembly process, and co-occurrence relationships. Environ. Res. 212: 113234.
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Gu, B., Wang, Y., Xu, J., Jiao*, N., Xu*, D. 2021. Water mass shapes the distribution patterns of planktonic ciliates (Alveolata, Ciliophora) in the subtropical Pearl River Estuary. Marine Pollution Bulletin, 167, 112341.
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Li, R., Hu, C., Wang, J., Sun, J., Wang, Y., Jiao*, N., Xu*, D. 2021. Biogeographical Distribution and Community Assembly of Active Protistan Assemblages along an Estuary to a Basin Transect of the Northern South China Sea. Microorganisms, 9: 351.
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Song#, W., Xu#, D., Chen, X., Warren, A., Shin, M.K., Song, W., Li, L. 2021 Overview of the diversity, phylogeny and biogeography of strombidiid oligotrich ciliates (Protista, Ciliophora), with a brief revision and a key to the known genera. Front. Microbiol. 12:700940. doi: 10.3389/fmicb.2021.700940
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Wang, R., Bai, Y., Hu, T., Xu, D., Suzuki, T., Hu, X. 2021. Integrative taxonomy and molecular phylogeny of three poorly known tintinnine ciliates, with the establishment of a new genus (Protista; Ciliophora; Oligotrichea). BMC Ecol Evo, 21:115.
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Xu*, D., Yang, Y., Zhang*, R. 2021. Measurement of Virus-Induced Phytoplankton Mortality. In: Gao et al., Research Methods of Environmental Physiology in Aquatic Sciences. Springer, Science Press, Beijing
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Yang*, J., Chen, Z., Chen, D., Xu, D. 2021. Spatial distribution of the microzooplankton communities in the northern South China Sea: Insights into their function in microbial food webs. Marine Pollution Bulletin, 162: 111898.
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蔡阮鸿，郑强，陈晓炜，徐大鹏，王煜，骆庭伟，张锐* 2021. 微型生物碳泵过程机制研究进展. 厦门大学学报. 60:355–366.
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陈一璇，孔菏君，徐大鹏* 2021. 基于高通量测序技术的北冰洋典型环境原生生物多样性研究进展. 海洋科学. 45, 81-88.
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Gu, R., Sun, P., Wang, Y., Yu, F., Jiao, N., Xu*, D. 2020. Genetic Diversity, Community Assembly, and Shaping Factors of Benthic Microbial Eukaryotes in Dongshan Bay, Southeast China. Frontiers in Microbiology, 11:592489. doi: 10.3389/fmicb.2020.592489
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Hu, C., Chen, X., Yu, L., Xu*, D., Jiao*, N. 2020. Elevated Contribution of Low Nucleic Acid Prokaryotes and Viral Lysis to the Prokaryotic Community Along the Nutrient Gradient From an Estuary to Open Ocean Transect. Frontiers in Microbiology, 11:612053. doi: 10.3389/fmicb.2020.612053
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Huang#, H., Yang#, J., Huang, S., Gu, B., Wang, Y., Wang, L., Jiao, N., Xu,* D. 2021. Spatial distribution of planktonic ciliates in the western Pacific Ocean: along the transect from Shenzhen (China) to Pohnpei (Micronesia). Marine Life Science & Technology, doi:10.1007/s42995-020-00075-7.
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Kim, S., Xu, D., Jung, J., Choi*, J. 2020. Phylogeny and genetic/morphological variation of Strombidinopsis minima-like species (Ciliophora: Choreotrichia). Journal of Eukaryotic Microbiology, 67: 115–124.
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Li, X., Warren, A., Jiao, N., Xu*, D. 2020. Distribution of protists in the deep South China Sea revealed by high-throughput sequencing. Journal of Ocean University of China, 19: 161-170.
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Xu* D, Kong H, Yang E-J, Li X, Jiao N, Warren A, Wang Y, Lee Y, Jung J and Kang S-H 2020. Contrasting Community Composition of Active Microbial Eukaryotes in Melt Ponds and Sea Water of the Arctic Ocean Revealed by High Throughput Sequencing. Frontiers in Microbiology, 11:1170. doi: 10.3389/fmicb.2020.01170
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Yang, J., Huang, S., Fan, W., Warren, A., Jiao, N., Xu*, D. 2020. Spatial distribution patterns of planktonic ciliate communities in the East China Sea: Potential indicators of water masses. Marine Pollution Bulletin, 156:111253.
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Zheng*, Q., Lin, W., Wang, Y., Xu, D., Liu, Y., Jiao, N. 2020. Top-down controls on nutrient cycling and population dynamics in a model estuarine photoautotroph–heterotroph co-culture system. Molecular Ecology, doing: 10.1111/mec.15750
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Li, X., Xu*, J., Shi, Z., Xu, D., Li, R., Li, Q., Liu, H. 2019. Regulation of protist grazing on bacterioplankton by hydrological conditions in coastal waters. Estuarine, Coastal & Shelf Science, 218: 1-8.
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Song#, W., Xu#, D., Zhang#, Q., Liu, W., Warren, A., Song*, W. 2019. Taxonomy and phylogeny of two poorly studied genera of marine oligotrich ciliates including descriptions of two new species: Cyrtostrombidium paraboreale sp. n. and Apostrombidium orientale sp. n. (Ciliophora: Spirotrichea). European Journal of Protistology, 70: 1–16.
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Sun*, P., Huang, L., Xu, D., Warren, A., Huang, B., Wang, Y., Wang, L., Xiao, W., Kong, J. 2019. Integrated space-time dataset reveals high diversity and distinct community structure of ciliates in mesopelagic waters of the Northern South China Sea. Frontiers in Microbiology, 10: 2178. doi: 10.3389/fmicb.2019.02178
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Li, R., Jiao, N., Warren, A., Xu*, D. 2018. Changes in community structure of active protistan assemblages from the lower Pearl River to coastal South China Sea. European Journal of Protistology, 63: 72–82.
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Xu*, D., Sun, P., Zhang, Y., Li, R., Huang, B., Jiao, N., & Warren, A. 2018. Pigmented microbial eukaryotes fuel the deep sea carbon pool in the tropical Western Pacific Ocean. Environmental Microbiology, 20: 3811–3824.
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Xu*, D., Jiao, N., Ren, R., Warren, A. 2017. Distribution and diversity of microbial eukaryotes in bathypelagic waters of the South China Sea. Journal of Eukaryotic Microbiology, 64, 370–382. doi:10.1111/jeu.12372
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