论文著作 Publications

Li Liu, Mingming Chen, Xianhui S. Wan, Chuanjun Du, Zhiyu Liu, Zhendong Hu,Zong-Pei Jiang, Kuanbo Zhou, Hongyang Lin, Hui Shen, Duo Zhao, Lanying Yuan, Lei Hou,Jin-Yu T. Yang, Xiaolin Li, Shuh-Ji Kao, Emily J. Zakem, Wei Qin, Minhan Dai, Yao Zhang.* 2023. Reduced nitrite accumulation at the primary nitrite maximum in the cyclonic eddies in the western North Pacific subtropical gyre. Science Advances. 9(33), eade2078.

Wenchao Deng*, Zihao Zhao, Yufang Li, Rongguang Cao, Mingming Chen, Kai Tang, Deli Wang, Wei Fan, Guangcheng Chen, Chen-Tung Arthur Chen, Yao Zhang.* 2023. Strategies of chemolithoautotrophs adapting to high temperature and extremely acidic conditions in a shallow hydrothermal ecosystem. Microbiome . 11: 270.

Zhang, L.#, Chen, M.#, Zheng, Y., Wang, J., Xiao, X., Chen, X., Hu, Chen., Shen, J., Liu, J., Tang, K., Xu, D., Shi, Q., Ning, X., Thomas, H., Qin, W., Zhao, M., Jiao, N.*, Zhang, Y.* 2023. Microbially driven fate of terrigenous particulate organic matter in oceans. Limnol. Oceanogr. 68, 148–164.

Mingming Chen, Yufang Li, Kai Tang, Anyi Hu, Wei Fan, Deli Wang, Chen-Tung Arthur Chen, Yao Zhang*. 2023. Highly diverse diazotrophs drive high N2 fixation rates in a shallow submarine hydrothermal system. Fundamental Research. https://doi.org/10.1016/j.fmre.2023.07.009

Chen, Z.; Wang, X.; Song, Y.; Zeng, Q.;  Zhang, Y.*; Luo, H.* 2022. Prochlorococcus have low global mutation rate and small effective population size. Nature Ecology & Evolution. 6(2), 183-194.

Dai, X.; Chen, M.; Wan, X.; Tan, E.; Zeng, J.; Chen, N.; Kao, S-J.; Zhang, Y.* 2022. Potential contributions of nitrifiers and denitrifiers to nitrous oxide sources and sinks in China's estuarine and coastal areas. Biogeosciences 19 (16), 3757–3773.

Deng, W.; Wang, S.; Wan, X.; Zheng, Z.; Jiao, N.; Kao, S-J.; Moore, J.; Zhang, Y.* 2021. Potential competition between marine heterotrophic prokaryotes and autotrophic picoplankton for nitrogen substrates. Limnol. Oceanogr. DOI: 10.1002/lno.11883.

Zhang, L.; Chen, M.; Chen, X.; Wang, J.; Zhang, Y.; Xiao, X.; Hu, C.; Liu, J.; Zhang, R.; Xu, D.; Jiao, N.; Zhang, Y.* 2021. Nitrifiers drive successions of particulate organic matter and microbial community composition in a starved macrocosm. Environ. Int. 157, 106776.

Zhang, Y.*; Qin, W.; Hou, L.; Zakem, E. J.; Wan, X.; Zhao, Z.; Liu, L.; Hunt, K. A.; Jiao, N.; Kao, S-J.; Tang, K.; Xie, X.; Shen, J.; Li, Y.; Chen, M.; Dai, X.; Liu, C.; Deng, W.; Dai, M.; Ingalls, A.E.; Stahl, D.A.; Herndl, G.J. 2020. Nitrifier adaptation to low energy flux controls inventory of reduced nitrogen in the dark ocean. P. Natl. Acad. Sci. USA. 117(9), 4823-4830.

Shen, J.; Jiao, N.; Dai, M.; Wan, H.; Qiu, G.; Chen, J.; Li, H.; Kao, S-J.; Yang, J-Y.T.; Cai, P.; Zhou, K.; Yang, W.; Zhu, Y.; Liu, Z.; Chen, M.; Zuo, Z.; Gaye, B.; Wiesner, M.G.; Zhang, Y.* 2020. Laterally transported particles from margins serve as a major carbon and energy source for dark ocean ecosystems. Geophys. Res. Lett. 47, e2020GL088971.

Wang, X.#; Zhang, Y.#; Ren, M.#; Xia, T.; Chu, X.; Liu, C.; Lin, X.; Huang, Y.; Chen, Z.; Yan, A.; Luo, H.* 2020. Cryptic speciation of a pelagic Roseobacter population varying at a few thousand nucleotide sites. ISME. J. 14, 3106-3119.

Chen, M.#; Song, Y.#; Feng, X.#; Tang, K.; Jiao, N.; Tian, J.; Zhang, Y.* 2020. Genomic Characteristics and Potential Metabolic Adaptations of Hadal Trench Roseobacter and Alteromonas Bacteria Based on Single-Cell Genomics Analyses. Front. Microbiol. 11, 1739.

Chen, M.; Lu, Y.; Jiao, N.; Tian, J.; Kao, S.-J.; Zhang, Y.* 2019. Biogeographic drivers of diazotrophs in the western Pacific Ocean. Limnol. Oceanogr. 64(3),1403-1421.

Ma, L.; Lin, H.; Xie, X.; Dai, M.; Zhang, Y.* 2019. Major role of ammonia-oxidizing bacteria in N2O production in the Pearl River estuary. Biogeosciences 16 (24), 4765–4781.

Hou, L.#; Xie, X.#; Wan, X.; Kao, S.-J.; Jiao, N.; Zhang, Y.* 2018. Niche differentiation of ammonia and nitrite oxidizers along a salinity gradient from the Pearl River estuary to the South China Sea. Biogeosciences 15, 5169–5187.

Li, Y.; Tang, K.; Zhang, L.; Zhao, Z.; Xie, X.; Chen, C.-T.A.; Wang, D.; Jiao, N.; Zhang, Y.* 2018. Coupled Carbon, Sulfur, and Nitrogen Cycles Mediated by Microorganisms in the Water Column of a Shallow-Water Hydrothermal Ecosystem. Front. Microbiol. 9, 2718.

Deng, W.; Peng, L.; Jiao, N.; Zhang, Y.* 2018. Differential incorporation of one-carbon substrates among microbial populations identified by stable isotope probing from the estuary to South China Sea. Sci. Rep.-UK. 8, 15378.

Zhang, Y.*; Liang, P.; Xie, X.; Dai, X.; Liu, H.; Zhang, C.; Kao, S-J.; Jiao, N. 2017. Succession of bacterial community structure and potential significance along a sediment core from site U1433 of IODP expedition 349, South China Sea. Marine Geology. 394, 125–132.

Zhang, Y.*#; Xiao, W.#; Jiao, N.* 2016. Linking biochemical properties of particles to particle-attached and free-living bacterial community structure along the particle density gradient from freshwater to open ocean. J. Geophys. Res-Biogeo. 121(8), 2261-2274.

Zhang, Y.; Sun, Y.; Jiao, N.; Stepanauskas, R.; Luo, H.* 2016. Ecological Genomics of the Uncultivated Marine Roseobacter Lineage CHAB-I-5. Appl. Environ. Microb. 82, 2100-2111.

Zhang, Y.*; Zhao, Z.; Dai, M.; Jiao, N.*; Herndl, G.J. 2014. Drivers Shaping the Diversity and Biogeography of Total and Active Bacterial Communities in the South China Sea. Mol. Ecol. 23(9), 2260-2274.

Zhang, Y.*#; Xie, X.#; Jiao, N.*; Hsiao, S. S.-Y.; Kao, S.-J. 2014. Diversity and distribution of amoA-type nitrifying and nirS-type denitrifying microbial communities in the Yangtze River Estuary. Biogeosciences 11(8), 2131–2145.