91.         JC Liu, LP Zhang*, Y Zeng, NW Chen, WC Chen, YY Li, HS Hong, Mixed integer programming for a swine manure handling system in the Jiulong River watershed, Aquatic Ecosystem Health & Management,  2006, 9 (1): 33-38 国外刊物

92.        QH Fang, HS Hong*, LP Zhang, WQ Chen, XZ Xue, Methods for integrating environment into decision- making in China, Aquatic Ecosystem Health & Management, ,2006, 9 (1): 73-78 国外刊物

93.        刘建昌，张珞平，洪华生，陈能汪, 基于面源污染控制的农业土地利用系统优化, 农业环境科学学报, 2006，25（2）：442-447

94.        黄云凤，张珞平，洪华生，陈求稳, 小流域氮流失特征及其影响因素, 水利学报, 2006，37（7）：801-806

95.        SH Cui, HS Hong*, A coastal vulnerability index and its application in Xiamen, China, Aquatic Ecosystem Health and Management Journal, In press 国外刊物

96.        Wang DZ*,  Zhang SG, Hong HS, A sulfotransferase specific to N-21 of gonyautoxin 2/3 from crude enzyme extraction of toxic dinoflagellate Alexandrium tamarense CI01 , Chinese Journal of Limnology and Oceanography,, In press

97.        周  东，李  炎，商少凌，邵  浩，马晓鑫, 潮间带底质现场表观光谱与遥感识别模型, 海洋与湖沼, Accepted

2006年根据本课题研究的部分结果，已有9篇论文发表，其它论文还在撰写中。

1.        Cai, P.H., Dai, M.H., Lv, D.W., Chen, W.F., 2006. How accurate are ²³⁴Th measurements in seawater based on the MnO₂-impregnated cartridge technique? Geochem. Geophys. Geosyst. 7, Q03020, doi:10.1029/2005GC001104. (SCI IF = 2.37)

2.        Cai, P.H., Dai, M.H., Chen, W.F., Tang, T.T., Zhou, K.B., 2006. On the importance of the decay of ²³⁴Th in determining size-fractionated C/²³⁴Th ratio on marine particles. Geophys. Res. Lett. 33, L23602, doi:10.1029/2006GL027792. (SCI IF = 2.491)

3.        Cai, W.J., Dai, M.H., Wang, Y.C., 2006. Air-sea exchange of carbon dioxide in ocean margins: A province-based synthesis. Geophys. Res. Lett. 33, L12603, doi:10.1029/2006GL026219. (SCI IF = 2.491)

4.        Liang, Y., Yuan, D.X.*, Li, Q.L., Lin, Q.M., 2006. Flow injection analysis of nanomolar level orthophosphate in seawater with solid phase enrichment and colorimetric detection. Mar. Chem. 103, 122-130. (SCI IF = 2.103)

5.        Liang, Y., Yuan, D.X.*, Li, Q.L., Lin, Q.M., 2006. Flow injection analysis of ultratrace orthophosphate in seawater with solid-phase enrichment and luminol chemiluminescence detection. Anal. Chim. Acta 571, 184-190. (SCI IF=2.76)

6.        Zhang, C.Y., Hu, C.M., Shang, S.L., Muller-Karger, F.E., Li, Y., Dai, M.H., Huang, B.Q., Ning, X.R., Hong, H.S.*, 2006. Bridging between SeaWiFS and MODIS for continuity of chlorophyll-a concentration assessments off Southeastern China. Remote Sensing of Environment 102 (3-4): 250-263. (SCI IF=2.833)

7.        Chen, X.H., Zeng, Y.H., Jiao, N.Z.*, 2006. Development and evaluation of specific 16S rDNA primers for marine Cytophaga–Flavobacteria cluster. Molecular Ecology Notes 6: f-1281. (SCI IF = 1.219)

8.        Jiao, N.Z., Feng, F.Y., Wei, B., 2006. Proteorhodopsin—a new path for biological utilization of light energy in the sea. Chi. Sci. Bul. 51, 889-896. (SCI IF = 0.783)

9.        焦念志, 冯福应, 魏博, 2006. 变形菌视紫质——海洋光能生物利用的新途径. 科学通报, 2006, 51(8): 887-894.